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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916888.1_cds_XP_016466564.1_59403
CDS Infomation

[gene=LOC107789300] [db_xref=GeneID:107789300] [protein=malonate--CoA ligase-like isoform X2] [protein_id=XP_016466564.1] [location=join(2867..3016,4502..4675,5024..5207,5321..5409,5914..5983,6148..6200,6308..6415,6665..6763,6957..7049,7144..7221,7371..7475,7729..7819,8507..8580,8721..8900,9216..9269,9422..9469)] [gbkey=CDS]
Sequence

ATGGAGCTGGTCAAGGAAGTTGCGAGCAAGGGACCTGAATCACAGCAGAATATTGCCATA
AGAGCTGATGAAAAGAGCTACAGTTACATGCAGTTGATATCATCTGCGAGGAAGATTTCT
AATTTGTTAAGCAAGCTAGATCTTAAAACTGACAAAGGCATCAAAGAAAATGAACATCTC
AATGGAACAAGAGTAGGGATTGTCGCCAAACCTTCAGCAGAGTTCGTTGCTGGAATACTA
GGTACCTGGCTTAGTGGAGGTTGTGCAGTTCCTCTTGCTCTGAGCTACCCTGAGACTGAA
CTACTACATGTGATGAATGACTCGGACATCTCCATGATTTTGAGTACTGAAGACCACCAA
GAACTTATGAGTACAATTGCAGCAAAAACTGGTGCTCAGTTATCTCTCATTCCTTCAATT
CCCGACGTGCATTCGTCAACGGAGCATGACCTGTCAAAAGACGTGGTTTCTGGTGGTCAA
CAAAATCTGCTAGAAATCAATTCCTATGGCGAGAACCCTGCTTTTATCTTGTACACCAGT
GGTACAACAGGGAAACCAAAAGGAGTTGTCCACACGCACAATGGAGTCTTAGCACAGGTC
CAAATGTTAGCTAACGCATGGGAATACACGTCCAAGGATCAATTTCTGCACTGTCTACCA
CTCCATCATGTGCATGGACTTTTCAATGCTTTACTGGCCCCTCTTTATGCAGGTTCCACG
GTCGACTTCGTGCCAAAATTCAGTGTGAGGGGAATTTGGCAGAGATGGCGTGAATCATAT
CCTACAGATGGGACTAAAATCGATAATGCCATAACGGTGTTTACTGGAGTTCCAACTATG
TATGCGCGATTGATACAAGGTTACGAAGCAATGGATCCAGAACTTAAAGCAGCTTCTGCC
TCAGCAGCAAGGCACTTGCGTCTTATGATGAGTGGCTCCTCTGCACTTCCTCTGCCCGTC
ATGCAGCAGTGGGAAACCATTACCGGACATCGCTTATTAGAACGTTATGGCATGACTGAG
TTTGTGATGGCAATCTCTAATCCCATAAGAGGCAAGCGAAAAGGAGGTACTGTTGGCAAG
CCATTTCCGGGTGTGCAGGCCAAGATTCTTTTGGAAGATGAGAGCAGTAATGATAAAGCT
GGAGTTGGGGAGCTTGGCATTAAAAGCCCATCATTGTTCAAAGAATACTGGAAACTACCT
GAGGTAACCAAGCAGTCATTTACTGAGGATGGATATTTCAAGACTGGAGATACTGTTACA
GTTGATGAAGACGGATATTACATCATTTTGGGACGTACCAATGCTGATATTATGAAGGTT
GGTGGATACAAATTATCAGCATTGGAAATTGAAGCAGTTCTGCTGGAGCATCCAACTATA
TCAGAGTGCTGTGTGTTGGGTTTGCCTGACAAAGACTATGGCGAAGTGGTATGTACAATA
GTTGTGCCTGAGGGTGAAGTGAAAAGAAGACGAGACGAAGAGCTAAAGCCTGCACTAACC
TTGCAAGAACTTTCTGATTGGGCGACAGAGAAACTTGCCCCTTACAAGATACCAACTCGT
CTACTTCTGTGGGACTCGTTGCCTCGAAATGCTATGGGGAAGGTAAATAAGAAAGAGCTC
AAAAGAAAGCTGACTGAAGATGCCAAATAA

Peptide Sequence

PEP ID

XP_016466564.1
PEP Infomation

PREDICTED: malonate--CoA ligase-like isoform X2 [Nicotiana tabacum]
Sequence

MELVKEVASKGPESQQNIAIRADEKSYSYMQLISSARKISNLLSKLDLKTDKGIKENEHL
NGTRVGIVAKPSAEFVAGILGTWLSGGCAVPLALSYPETELLHVMNDSDISMILSTEDHQ
ELMSTIAAKTGAQLSLIPSIPDVHSSTEHDLSKDVVSGGQQNLLEINSYGENPAFILYTS
GTTGKPKGVVHTHNGVLAQVQMLANAWEYTSKDQFLHCLPLHHVHGLFNALLAPLYAGST
VDFVPKFSVRGIWQRWRESYPTDGTKIDNAITVFTGVPTMYARLIQGYEAMDPELKAASA
SAARHLRLMMSGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPIRGKRKGGTVGK
PFPGVQAKILLEDESSNDKAGVGELGIKSPSLFKEYWKLPEVTKQSFTEDGYFKTGDTVT
VDEDGYYIILGRTNADIMKVGGYKLSALEIEAVLLEHPTISECCVLGLPDKDYGEVVCTI
VVPEGEVKRRRDEELKPALTLQELSDWATEKLAPYKIPTRLLLWDSLPRNAMGKVNKKEL
KRKLTEDAK

Transcript Sequence

Gene sequence data has not been registered.